plot_habitat_clustering_pca_3d_interactive

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the Habitat Guide and Python API guide (v2.0) for usage.

plot_habitat_clustering_pca_3d_interactive(features: np.ndarray, labels: np.ndarray, *, centers: np.ndarray | None = None, title: str | None = None, n_clusters: int | None = None, palette: Sequence[str] | None = None, alpha: float = 0.35, marker_size: int = 20) → go.Figure[source]

Interactive 3D PCA scatter using plotly (optional dependency).

Parameters:

  • features – Feature matrix, shape (n_samples, n_features).

  • labels – Habitat assignment per row, shape (n_samples,).

  • centers – Optional centroid matrix, shape (n_habitats, n_features).

  • title – Plot title.

  • n_clusters – Selected cluster count for the default title.

  • palette – Optional hex colour list.

  • alpha – Scatter opacity in [0, 1].

  • marker_size – Plotly marker size scale.

Returns:

A plotly Figure ready for write_html.

Raises:

OptionalDependencyError – When plotly is not installed.