.. _sphx_glr_auto_examples_00_full_pipeline:

0. Complete analysis
====================

Read this page first. It is one two-step study from images to a feature
table and a saved model. Later sections open the same
:class:`~habit.spec.HabitatSpec` one stage at a time.

:doc:`/auto_examples/00_full_pipeline/plot_01_full_pipeline`


.. raw:: html

  <div id='sg-tag-list' class='sphx-glr-tag-list'></div>


.. raw:: html

    <div class="sphx-glr-thumbnails">

.. thumbnail-parent-div-open

.. raw:: html

    <div class="sphx-glr-thumbcontainer" tooltip="Background. A tumour is not uniform: some parts enhance strongly, some wash out, some are necrotic. Habitat analysis splits the ROI into a few sub-regions (habitats) whose voxels behave alike across the DCE phases, using one definition shared by every patient, and then describes each patient by how much of each habitat they have and how the habitats are arranged.">

.. only:: html

  .. image:: /auto_examples/00_full_pipeline/images/thumb/sphx_glr_plot_01_full_pipeline_thumb.png
    :alt:

  :doc:`/auto_examples/00_full_pipeline/plot_01_full_pipeline`

.. raw:: html

      <div class="sphx-glr-thumbnail-title">A complete habitat analysis</div>
    </div>


.. thumbnail-parent-div-close

.. raw:: html

    </div>


.. toctree::
   :hidden:

   /auto_examples/00_full_pipeline/plot_01_full_pipeline